ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 159.00 0.37 0.26 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 8.00 0.02 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 200.00 0.47 0.33 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 28117.00 65.92 46.67 84.96 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 304.00 0.71 0.50 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 163.00 1.97 0.27 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 1902.00 16.15 3.16 42.14 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 24.00 0.31 0.04 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 1012.00 12.52 1.68 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 1146.00 14.18 1.90 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 523.00 6.47 0.87 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 1.00 0.01 0.00 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 401.00 0.12 0.67 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 168.00 11.58 0.28 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 876.00 26.40 1.45 53.51 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 53.00 1.60 0.09 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 761.00 22.94 1.26 46.49 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 1839.00 35.12 3.05 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 3.00 0.06 0.00 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 239.00 38.24 0.40 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 5597.00 90.25 9.29 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 527.00 49.11 0.87 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 27.00 0.19 0.04 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 22.00 0.16 0.04 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 28.00 0.20 0.05 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)