ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 80.00 28.88 0.13 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 77.00 0.03 0.13 98.72 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 266.00 14.01 0.44 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 497.00 26.19 0.82 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 579.00 19.57 0.96 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 26.00 0.31 0.04 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 8.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 359.00 0.14 0.60 33.49 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 554.00 20.72 0.92 89.79 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 232.00 8.68 0.39 29.52 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 1273.00 18.92 2.11 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 142389.00 68.85 236.35 93.34 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 4530.00 2.19 7.52 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 91.00 8.82 0.15 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 64.00 1.52 0.11 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 29.00 0.21 0.05 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 190.00 1.42 0.32 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 152.00 1.14 0.25 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 112.00 0.84 0.19 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 512.00 3.84 0.85 97.9 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 59.00 0.44 0.10 38.56 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 207.00 1.55 0.34 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1279.00 13.53 2.12 27.29 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 295.00 3.12 0.49 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 204.00 2.17 0.34 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA temporal lobe (Tissue)