ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 37835.00 20.95 62.80 100.0 SNORD115-34-201 snoRNA temporal lobe (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 2205.00 36.33 3.66 100.0 RNU5E-1-201 snRNA temporal lobe (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 1.00 0.01 0.00 50.0 RNA5SP370-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 37.00 25.00 0.06 100.0 SNORA31-201 snoRNA temporal lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 4.00 0.05 0.01 100.0 RNA5SP389-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 14.00 0.17 0.02 82.35 RNA5SP389-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 7.00 0.09 0.01 53.85 RNA5SP389-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 1226.00 1.67 2.03 100.0 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 4574.00 6.24 7.59 75.03 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1478.00 2.02 2.45 75.79 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 1819.00 2.48 3.02 78.68 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1347.00 1.84 2.24 54.31 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 87.00 0.12 0.14 100.0 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 196.00 0.27 0.33 19.07 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2811.00 3.83 4.67 38.6 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 581.97 0.79 0.97 59.63 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1683.00 2.30 2.79 57.82 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 3849.00 5.25 6.39 100.0 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 10717.40 14.62 17.79 35.75 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 20217.38 27.58 33.56 70.35 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 365.44 0.50 0.61 28.51 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 1134.00 1.55 1.88 92.42 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 3240.00 75.74 5.38 100.0 SNORD114-14-201 snoRNA temporal lobe (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1481.00 11.68 2.46 100.0 SNORD104-201 snoRNA temporal lobe (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 1301.00 10.26 2.16 100.0 SNORD104-201 snoRNA temporal lobe (Tissue)