ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 306492.00 64.25 508.73 98.14 SNHG14-306 lncRNA temporal lobe (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 21375.00 4.48 35.48 100.0 SNHG14-306 lncRNA temporal lobe (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 619.00 1.22 1.03 100.0 ENST00000666735 lncRNA temporal lobe (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 24907.00 48.91 41.34 100.0 ENST00000666735 lncRNA temporal lobe (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 18241.00 84.00 30.28 100.0 MEG8-242 lncRNA temporal lobe (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 26332.19 25.91 43.71 37.97 SNHG14-312 lncRNA temporal lobe (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 45045.39 44.32 74.77 64.95 SNHG14-312 lncRNA temporal lobe (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 5596.00 5.51 9.29 100.0 SNHG14-312 lncRNA temporal lobe (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 434.00 0.63 0.72 100.0 MEG8-244 lncRNA temporal lobe (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 1844.00 2.66 3.06 100.0 MEG8-244 lncRNA temporal lobe (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 64616.00 93.26 107.25 99.96 MEG8-244 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 913.00 0.03 1.52 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 15.00 0.00 0.02 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 8411.00 0.27 13.96 99.32 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 610.97 0.02 1.01 41.9 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 11236.00 0.36 18.65 82.61 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 2074885.00 66.03 3444.02 98.5 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 2326.00 0.07 3.86 63.26 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 145969.00 4.64 242.29 99.3 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 19069.00 0.61 31.65 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 68568.00 2.18 113.81 97.03 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 256.00 0.01 0.42 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1639.00 0.05 2.72 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 3865.00 0.12 6.42 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 4463.00 0.14 7.41 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)