ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 44867.00 43.80 74.47 82.43 MIR151A-201 miRNA temporal lobe (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 44196.00 43.15 73.36 100.0 MIR151A-201 miRNA temporal lobe (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1765.00 93.49 2.93 100.0 DENND3-221 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 1824.00 0.55 3.03 100.0 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 2453.00 0.75 4.07 100.0 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 191.00 0.06 0.32 100.0 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 170.00 0.05 0.28 68.55 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 35.00 0.01 0.06 100.0 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 65.00 0.02 0.11 73.86 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 6986.00 2.12 11.60 75.95 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 23.00 0.01 0.04 26.14 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 10735.00 82.49 17.82 100.0 HSPA8-211 retained intron temporal lobe (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 1543.00 17.55 2.56 100.0 SCARNA9-201 lncRNA temporal lobe (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 43949.00 88.79 72.95 100.0 TAF1D-215 retained intron temporal lobe (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 421.00 0.85 0.70 100.0 TAF1D-215 retained intron temporal lobe (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 2746.00 48.58 4.56 100.0 HSPA8-215 retained intron temporal lobe (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 16.00 0.28 0.03 100.0 HSPA8-215 retained intron temporal lobe (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 1334.00 23.60 2.21 100.0 HSPA8-215 retained intron temporal lobe (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 489.00 12.29 0.81 100.0 RPS2-215 retained intron temporal lobe (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 1971.00 85.70 3.27 87.8 ENST00000548801 lncRNA temporal lobe (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 1270.00 9.57 2.11 100.0 ENST00000554988 lncRNA temporal lobe (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 2999.00 22.60 4.98 100.0 ENST00000554988 lncRNA temporal lobe (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 97.00 0.73 0.16 100.0 ENST00000554988 lncRNA temporal lobe (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 1373.00 0.59 2.28 100.0 SNHG14-220 retained intron temporal lobe (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 2147.00 0.92 3.56 100.0 SNHG14-220 retained intron temporal lobe (Tissue)