ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 216839.00 90.44 359.92 100.0 SNORD69-201 snoRNA temporal lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 3905.00 1.63 6.48 100.0 SNORD69-201 snoRNA temporal lobe (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 2504.00 1.04 4.16 100.0 SNORD69-201 snoRNA temporal lobe (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 1044.00 55.30 1.73 77.45 SNORD70-201 snoRNA temporal lobe (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 3166.00 73.73 5.26 86.57 B4GALNT2-202 protein coding temporal lobe (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 152.00 3.54 0.25 100.0 B4GALNT2-202 protein coding temporal lobe (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 3250.00 89.53 5.39 100.0 NDE1-202 protein coding temporal lobe (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 22.00 84.62 0.04 100.0 MIR208B-201 miRNA temporal lobe (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 226.00 62.78 0.38 100.0 MIR450B-201 miRNA temporal lobe (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 698.00 61.77 1.16 100.0 MIR887-201 miRNA temporal lobe (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 6010.00 90.31 9.98 100.0 MIR889-201 miRNA temporal lobe (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 5534.00 79.03 9.19 100.0 SNORD111-201 snoRNA temporal lobe (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 3059.00 62.57 5.08 81.9 SNORD88A-201 snoRNA temporal lobe (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 591.00 95.17 0.98 100.0 MIR548K-201 miRNA temporal lobe (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 843.00 50.91 1.40 100.0 MIR320B2-201 miRNA temporal lobe (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 1093.00 91.08 1.81 100.0 MIR1271-201 miRNA temporal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 86053.00 92.96 142.84 100.0 SNORD100-201 snoRNA temporal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1142.00 1.23 1.90 100.0 SNORD100-201 snoRNA temporal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 335.00 0.36 0.56 100.0 SNORD100-201 snoRNA temporal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 70.00 0.08 0.12 100.0 SNORD100-201 snoRNA temporal lobe (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 3071.00 68.53 5.10 100.0 SNORD111B-201 snoRNA temporal lobe (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 5655.00 41.30 9.39 100.0 RNU2-36P-201 snRNA temporal lobe (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 99.00 0.72 0.16 100.0 RNU2-36P-201 snRNA temporal lobe (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 427.00 0.97 0.71 100.0 SNORD19C-201 snoRNA temporal lobe (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 40638.00 92.21 67.45 98.75 SNORD19C-201 snoRNA temporal lobe (Tissue)