ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 4081.00 92.14 14.44 100.0 SLC49A4-201 protein coding parietal lobe (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 2985.00 21.35 10.56 100.0 ATP5MC3-201 protein coding parietal lobe (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 804.00 90.03 2.84 100.0 CDC25A-201 protein coding parietal lobe (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 456.00 78.89 1.61 100.0 BLOC1S4-201 protein coding parietal lobe (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 235.00 3.34 0.83 100.0 ATAD5-201 protein coding parietal lobe (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 643.00 63.98 2.27 100.0 SLITRK5-201 protein coding parietal lobe (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 20.00 43.48 0.07 100.0 HASPIN-201 protein coding parietal lobe (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 106.00 18.63 0.37 100.0 PRR14L-201 protein coding parietal lobe (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 3291.00 97.05 11.64 100.0 ATG101-201 protein coding parietal lobe (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 1918.00 80.42 6.79 100.0 PRICKLE1-201 protein coding parietal lobe (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 143.00 95.33 0.51 100.0 MIR133A2-201 miRNA parietal lobe (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 4.00 11.76 0.01 100.0 PBLD-204 protein coding parietal lobe (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 897035.00 90.20 3173.43 99.24 MIRLET7BHG-201 lncRNA parietal lobe (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 55579.00 5.59 196.62 90.3 MIRLET7BHG-201 lncRNA parietal lobe (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 18.00 1.55 0.06 45.0 MIR375-201 miRNA parietal lobe (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 1126.00 97.24 3.98 98.77 MIR375-201 miRNA parietal lobe (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 5876.00 76.38 20.79 100.0 MIR30E-201 miRNA parietal lobe (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 1171.00 15.22 4.14 100.0 MIR30E-201 miRNA parietal lobe (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 464.00 45.90 1.64 100.0 MIR29A-201 miRNA parietal lobe (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 539.00 85.42 1.91 100.0 MIR345-201 miRNA parietal lobe (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 173066.00 98.69 612.25 100.0 MIR16-2-201 miRNA parietal lobe (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 43706.00 91.04 154.62 100.0 MIR340-201 miRNA parietal lobe (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 1718.00 3.58 6.08 100.0 MIR340-201 miRNA parietal lobe (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 11179.00 83.23 39.55 100.0 MIR107-201 miRNA parietal lobe (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 2421.00 92.48 8.56 95.05 MIR381-201 miRNA parietal lobe (Tissue)