ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 6358.00 67.67 22.49 100.0 SNORD6-201 snoRNA parietal lobe (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1071.00 11.40 3.79 100.0 SNORD6-201 snoRNA parietal lobe (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 178.00 0.87 0.63 100.0 RNY3-201 misc RNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 50947.00 64.99 180.23 97.53 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 405.00 0.52 1.43 100.0 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 1208.00 1.54 4.27 100.0 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 139.00 0.18 0.49 100.0 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 3013.00 3.84 10.66 84.85 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6686.13 8.53 23.65 48.24 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 7382.04 9.42 26.12 53.26 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 7414.00 96.50 26.23 97.55 MIR146B-201 miRNA parietal lobe (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 293.00 69.43 1.04 100.0 SNHG20-201 lncRNA parietal lobe (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 57.00 12.61 0.20 100.0 ATP5MK-205 protein coding parietal lobe (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 73.00 16.15 0.26 100.0 ATP5MK-205 protein coding parietal lobe (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 3.00 4.84 0.01 100.0 LINC01556-201 lncRNA parietal lobe (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 44.00 83.02 0.16 100.0 ATAD3A-202 protein coding parietal lobe (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 4530.00 48.74 16.03 70.75 TMC5-202 protein coding parietal lobe (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 11.00 34.38 0.04 100.0 ZMYM2-203 protein coding parietal lobe (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 1162.00 9.29 4.11 100.0 RNVU1-7-201 snRNA parietal lobe (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 2257.00 45.08 7.98 100.0 SNORD24-201 snoRNA parietal lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 5111.00 10.87 18.08 95.23 SNORD101-201 snoRNA parietal lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 29634.00 63.04 104.84 94.48 SNORD101-201 snoRNA parietal lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 1506.00 3.20 5.33 100.0 SNORD101-201 snoRNA parietal lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 228.00 0.49 0.81 100.0 SNORD101-201 snoRNA parietal lobe (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 21001.00 95.15 74.30 100.0 SNORD37-201 snoRNA parietal lobe (Tissue)