ENCFF001RLS
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | parietal lobe (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000AFY |
| Description: | Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000362973.1 | ENST00000362973.1_96_117_+ | 96–117 | 1908.00 | 35.24 | 6.75 | 72.49 | RNA5SP358-201 | rRNA pseudogene | parietal lobe (Tissue) |
| ENST00000363124.1 | ENST00000363124.1_17_32_+ | 17–32 | 40.00 | 1.38 | 0.14 | 83.33 | RNA5SP145-201 | rRNA pseudogene | parietal lobe (Tissue) |
| ENST00000363182.1 | ENST00000363182.1_1_32_+ | 1–32 | 2289.00 | 20.66 | 8.10 | 100.0 | Y_RNA.105-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000363194.1 | ENST00000363194.1_1_32_+ | 1–32 | 4007.00 | 26.44 | 14.18 | 100.0 | RNY4P9-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_63_116_+ | 63–116 | 3350.00 | 5.05 | 11.85 | 100.0 | RNU5B-1-201 | snRNA | parietal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_68_116_+ | 68–116 | 2577.00 | 3.88 | 9.12 | 100.0 | RNU5B-1-201 | snRNA | parietal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_78_+ | 1–78 | 11334.00 | 17.08 | 40.10 | 70.36 | RNU5B-1-201 | snRNA | parietal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_69_+ | 1–69 | 702.00 | 1.06 | 2.48 | 100.0 | RNU5B-1-201 | snRNA | parietal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_86_+ | 1–86 | 10146.00 | 15.29 | 35.89 | 100.0 | RNU5B-1-201 | snRNA | parietal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_55_116_+ | 55–116 | 1066.00 | 1.61 | 3.77 | 100.0 | RNU5B-1-201 | snRNA | parietal lobe (Tissue) |
| ENST00000363293.1 | ENST00000363293.1_2_82_+ | 2–82 | 109847.00 | 90.19 | 388.61 | 97.06 | SNORD115-18-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363341.1 | ENST00000363341.1_1_36_+ | 1–36 | 2923.00 | 2.70 | 10.34 | 54.25 | RNY4P27-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000363341.1 | ENST00000363341.1_1_32_+ | 1–32 | 83648.00 | 77.15 | 295.92 | 97.14 | RNY4P27-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000363444.1 | ENST00000363444.1_74_99_+ | 74–99 | 2339.00 | 15.07 | 8.27 | 100.0 | Y_RNA.136-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000363608.1 | ENST00000363608.1_2_82_+ | 2–82 | 48176.00 | 52.90 | 170.43 | 100.0 | SNORD115-41-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363633.1 | ENST00000363633.1_2_82_+ | 2–82 | 27640.00 | 37.14 | 97.78 | 100.0 | SNORD115-5-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363723.1 | ENST00000363723.1_2_82_+ | 2–82 | 9955.00 | 35.84 | 35.22 | 100.0 | SNORD115-33-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363742.1 | ENST00000363742.1_4_67_+ | 4–67 | 12406.00 | 89.28 | 43.89 | 99.48 | SNORD114-25-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363762.1 | ENST00000363762.1_3_72_+ | 3–72 | 14069.00 | 90.41 | 49.77 | 100.0 | SNORD113-7-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363856.1 | ENST00000363856.1_2_82_+ | 2–82 | 5753.00 | 14.40 | 20.35 | 100.0 | SNORD115-8-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363872.1 | ENST00000363872.1_74_98_+ | 74–98 | 984.00 | 46.02 | 3.48 | 100.0 | Y_RNA.181-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000363887.1 | ENST00000363887.1_2_82_+ | 2–82 | 24734.00 | 36.78 | 87.50 | 100.0 | SNORD115-16-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000364079.1 | ENST00000364079.1_2_82_+ | 2–82 | 11313.00 | 55.38 | 40.02 | 100.0 | SNORD115-32-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000364117.1 | ENST00000364117.1_2_82_+ | 2–82 | 13514.00 | 38.06 | 47.81 | 100.0 | SNORD115-30-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000364228.1 | ENST00000364228.1_1_63_+ | 1–63 | 5243.00 | 5.98 | 18.55 | 100.0 | RNY1-201 | misc RNA | parietal lobe (Tissue) |