ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 583.00 14.44 2.06 18.76 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 378.00 19.94 1.34 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 534.00 59.53 1.89 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 1616.00 86.65 5.72 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 98.00 22.48 0.35 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 6.00 0.14 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 13.00 0.30 0.05 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 13.00 0.30 0.05 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 19.00 0.44 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 21.00 0.48 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 8.00 0.18 0.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 1261.00 0.26 4.46 95.97 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 994.00 0.20 3.52 65.61 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 465.00 0.09 1.65 55.69 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 1139.00 9.43 4.03 19.52 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 4650.00 97.75 16.45 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 1312.00 39.07 4.64 99.02 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 1046.00 89.94 3.70 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 12.00 0.03 0.04 21.43 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 44.00 0.12 0.16 78.57 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 24495.00 64.57 86.66 80.99 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 8610.18 32.28 30.46 43.74 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 633.00 2.37 2.24 57.18 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 14565.29 54.60 51.53 65.15 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 64710.00 94.32 228.92 99.06 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA parietal lobe (Tissue)