ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 9.00 0.21 0.03 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 148.00 0.79 0.52 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 312.00 1.66 1.10 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 24.00 0.13 0.08 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 21.00 0.11 0.07 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 506.00 2.70 1.79 99.8 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 47.00 0.25 0.17 25.54 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 27.00 1.09 0.10 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 221.00 8.92 0.78 20.79 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 14.00 0.54 0.05 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 168.00 0.09 0.59 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 5.00 0.00 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 133.00 0.07 0.47 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 79.00 0.04 0.28 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 179894.00 91.90 636.41 98.33 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 11.00 0.51 0.04 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 7129.00 40.82 25.22 56.85 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 1.00 0.05 0.00 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 1236.00 16.30 4.37 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 1311.00 17.29 4.64 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 245.00 3.23 0.87 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 203.00 0.04 0.72 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 1141.00 50.91 4.04 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 2525.00 62.55 8.93 81.24 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 11.00 0.27 0.04 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA parietal lobe (Tissue)