ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 621.00 0.18 2.20 100.0 SNHG32-223 lncRNA parietal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 3160.00 0.92 11.18 65.22 SNHG32-223 lncRNA parietal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 330768.00 96.43 1170.16 100.0 SNHG32-223 lncRNA parietal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 26812.00 75.93 94.85 94.59 SNHG32-227 lncRNA parietal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 357.00 1.01 1.26 100.0 SNHG32-227 lncRNA parietal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 1132.00 3.21 4.00 100.0 SNHG32-227 lncRNA parietal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 1350.00 3.82 4.78 100.0 SNHG32-227 lncRNA parietal lobe (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 634.00 84.42 2.24 100.0 B4GALT1-203 nonsense mediated decay parietal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 368.00 1.75 1.30 100.0 ENST00000722183 lncRNA parietal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 7329.00 34.76 25.93 64.92 ENST00000722183 lncRNA parietal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 3493.00 16.57 12.36 100.0 ENST00000722183 lncRNA parietal lobe (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 1096.00 71.31 3.88 100.0 MIR34BHG-202 lncRNA parietal lobe (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 49981.00 83.17 176.82 87.09 THBS3-AS1-228 lncRNA parietal lobe (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 3.00 30.00 0.01 100.0 MIR200CHG-202 lncRNA parietal lobe (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 1.00 10.00 0.00 100.0 MIR200CHG-202 lncRNA parietal lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 345.00 3.12 1.22 100.0 SNHG16-266 lncRNA parietal lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 1810.00 16.39 6.40 100.0 SNHG16-266 lncRNA parietal lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 685.00 6.20 2.42 100.0 SNHG16-266 lncRNA parietal lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 418.00 3.78 1.48 100.0 SNHG16-266 lncRNA parietal lobe (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 113.00 41.09 0.40 100.0 MEG8-261 lncRNA parietal lobe (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 402.00 23.66 1.42 100.0 NR2F2-AS1-327 lncRNA parietal lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 35.00 1.84 0.12 25.18 ENST00000747675 lncRNA parietal lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 487.00 25.54 1.72 100.0 ENST00000747675 lncRNA parietal lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 23.00 1.21 0.08 39.66 ENST00000747675 lncRNA parietal lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 81.00 4.25 0.29 69.83 ENST00000747675 lncRNA parietal lobe (Tissue)