ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 246998.00 94.83 873.80 99.27 MEG8-251 lncRNA parietal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 370.00 0.14 1.31 44.21 MEG8-251 lncRNA parietal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 4072.00 1.56 14.41 88.1 MEG8-251 lncRNA parietal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 839.00 0.32 2.97 100.0 MEG8-251 lncRNA parietal lobe (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 24314.00 39.60 86.02 62.03 SNHG14-336 lncRNA parietal lobe (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 33556.00 54.66 118.71 85.72 SNHG14-336 lncRNA parietal lobe (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 18972.00 64.31 67.12 93.44 SNHG14-341 lncRNA parietal lobe (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 3730.00 53.10 13.20 100.0 NCL-211 retained intron parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 2.00 0.04 0.01 100.0 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 33.00 0.66 0.12 35.48 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 739.00 14.83 2.61 100.0 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 722.00 14.49 2.55 100.0 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 14.00 0.28 0.05 100.0 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 60.00 1.20 0.21 64.52 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 69413.00 91.63 245.56 100.0 MIR124-1HG-216 lncRNA parietal lobe (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 196.00 14.13 0.69 100.0 SNHG10-212 lncRNA parietal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 20924.65 37.12 74.02 39.3 SNHG19-202 lncRNA parietal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 32127.05 57.00 113.66 71.2 SNHG19-202 lncRNA parietal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 8.39 0.01 0.03 83.91 SNHG19-202 lncRNA parietal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 1.44 0.00 0.01 72.05 SNHG19-202 lncRNA parietal lobe (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 6174.00 26.72 21.84 100.0 MIR222HG-206 lncRNA parietal lobe (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 12158.00 52.63 43.01 83.59 MIR222HG-206 lncRNA parietal lobe (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 324.00 1.40 1.15 100.0 MIR222HG-206 lncRNA parietal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 3.78 27.00 0.01 75.6 MIR302CHG-205 lncRNA parietal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 1.00 7.14 0.00 100.0 MIR302CHG-205 lncRNA parietal lobe (Tissue)