ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 55333.00 96.54 195.75 99.94 MEG8-244 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 477.00 0.03 1.69 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 7.00 0.00 0.02 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 6495.00 0.47 22.98 99.39 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 394.18 0.03 1.39 43.13 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 5767.00 0.41 20.40 73.5 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 504124.00 36.21 1783.44 97.6 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 2265.00 0.16 8.01 67.31 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 135670.00 9.74 479.96 99.45 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 10854.00 0.78 38.40 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 87093.00 6.26 308.11 98.56 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 215.00 0.02 0.76 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1162.00 0.08 4.11 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1454.00 0.10 5.14 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 4374.00 0.31 15.47 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 329.00 0.02 1.16 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 354.00 0.03 1.25 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 3277.00 0.24 11.59 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 202.00 0.01 0.71 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 3288.00 0.24 11.63 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 51420.00 3.69 181.91 67.92 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 1834.00 0.13 6.49 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 278408.00 20.00 984.92 96.5 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 5508.00 0.40 19.49 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 741.00 0.05 2.62 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)