ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 610.00 25.77 2.16 88.79 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 7.00 0.30 0.02 100.0 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 348.00 14.70 1.23 100.0 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 70.00 2.96 0.25 100.0 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 2014.00 3.02 7.12 75.94 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 281.00 0.42 0.99 99.29 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 1337.00 2.00 4.73 100.0 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 3451.00 5.17 12.21 56.23 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 1258.00 1.88 4.45 100.0 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 1320.00 1.98 4.67 100.0 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 597.00 0.89 2.11 100.0 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 2630.00 3.94 9.30 100.0 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 1500.00 2.25 5.31 100.0 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 7248.00 10.86 25.64 52.88 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 7341.00 10.99 25.97 100.0 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 15198.00 22.76 53.77 80.81 ENST00000651540 lncRNA parietal lobe (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 14316.00 1.10 50.65 100.0 MIRLET7A1HG-203 lncRNA parietal lobe (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 8619.00 90.82 30.49 100.0 MEG8-225 lncRNA parietal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 197448.00 78.44 698.51 100.0 SNHG29-232 lncRNA parietal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 179.00 0.07 0.63 100.0 SNHG29-232 lncRNA parietal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 698.00 0.28 2.47 100.0 SNHG29-232 lncRNA parietal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 7612.00 3.02 26.93 100.0 SNHG29-232 lncRNA parietal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 7372.00 2.93 26.08 100.0 SNHG29-232 lncRNA parietal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 29853.00 11.86 105.61 100.0 SNHG29-232 lncRNA parietal lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 493.00 0.17 1.74 100.0 SNHG14-234 lncRNA parietal lobe (Tissue)