ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 66.00 29.07 0.23 100.0 MIR376A1-201 miRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 2834.00 1.08 10.03 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 2212.85 0.84 7.83 42.42 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 155143.00 59.08 548.85 98.84 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 11.00 0.00 0.04 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 13962.00 5.32 49.39 60.32 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 22795.00 8.68 80.64 74.39 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 5023.00 1.91 17.77 86.81 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 2722.64 1.04 9.63 52.2 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 90.00 0.03 0.32 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 10.00 0.00 0.04 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 443.00 0.17 1.57 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 594.00 0.23 2.10 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 8959.22 3.41 31.69 57.89 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 4691.09 1.79 16.60 42.24 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 5390.00 2.09 19.07 100.0 U2.6-201 snRNA parietal lobe (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 711.00 0.75 2.52 46.68 ENST00000619323 lncRNA parietal lobe (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 91622.00 97.00 324.13 98.5 ENST00000619323 lncRNA parietal lobe (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 134.00 12.12 0.47 100.0 SCARNA4-202 scaRNA parietal lobe (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 2144.00 73.47 7.58 100.0 ENST00000625572 miRNA parietal lobe (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 20264.00 93.07 71.69 100.0 ENST00000628177 snoRNA parietal lobe (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 1826.00 79.53 6.46 100.0 ENST00000630615 snoRNA parietal lobe (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 36.00 20.57 0.13 100.0 DMRT2-209 protein coding parietal lobe (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 11.00 6.29 0.04 100.0 DMRT2-209 protein coding parietal lobe (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 632.00 7.71 2.24 100.0 SNORD98-201 snoRNA parietal lobe (Tissue)