ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 15861.00 82.45 56.11 100.0 SNORD92-201 snoRNA parietal lobe (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 4934.00 70.07 17.45 100.0 NSRP1-214 protein coding parietal lobe (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 1356.00 19.26 4.80 78.93 NSRP1-214 protein coding parietal lobe (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 15.00 0.39 0.05 100.0 MIR23AHG-201 lncRNA parietal lobe (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 1224.00 31.76 4.33 92.1 MIR23AHG-201 lncRNA parietal lobe (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 750.00 19.46 2.65 87.92 MIR23AHG-201 lncRNA parietal lobe (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 762.00 19.77 2.70 75.82 MIR23AHG-201 lncRNA parietal lobe (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 571.00 14.82 2.02 67.49 MIR23AHG-201 lncRNA parietal lobe (Tissue)
ENST00000590797.5 ENST00000590797.5_2254_2275_+ 2254–2275 1.00 11.11 0.00 100.0 MIR122HG-201 lncRNA parietal lobe (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 18.00 36.73 0.06 100.0 ODAD3-204 nonsense mediated decay parietal lobe (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 46.00 0.30 0.16 100.0 VMP1-217 retained intron parietal lobe (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 1.00 0.01 0.00 100.0 VMP1-217 retained intron parietal lobe (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 9349.00 60.47 33.07 65.03 VMP1-217 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 341.00 0.05 1.21 100.0 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 567760.51 76.31 2008.56 84.76 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 174471.86 23.45 617.23 24.14 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 2881.00 0.39 10.19 86.08 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 96.00 0.01 0.34 100.0 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 9.00 0.00 0.03 100.0 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 2.00 66.67 0.01 100.0 ENST00000597420 lncRNA parietal lobe (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 33.00 0.97 0.12 100.0 RPS11-206 retained intron parietal lobe (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 2823.00 82.57 9.99 100.0 RPS11-206 retained intron parietal lobe (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 11954.00 69.43 42.29 71.21 CARMN-209 lncRNA parietal lobe (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 2666.00 31.66 9.43 100.0 ENST00000602478 lncRNA parietal lobe (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 1.00 12.50 0.00 100.0 PPFIA1P1-201 processed pseudogene parietal lobe (Tissue)