ENCFF001RLS

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 634.00 0.37 2.24 100.0 RACK1-229 protein coding parietal lobe (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 19350.00 21.79 68.45 74.19 RACK1-230 retained intron parietal lobe (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 66967.00 75.43 236.91 96.68 RACK1-230 retained intron parietal lobe (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 849.00 82.67 3.00 100.0 SCARNA5-201 scaRNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 2087.00 0.70 7.38 100.0 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 188033.00 63.23 665.20 97.05 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 7723.00 2.60 27.32 57.43 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 8445.00 2.84 29.88 100.0 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 844.00 0.28 2.99 100.0 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 3996.00 1.34 14.14 100.0 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 12752.00 4.29 45.11 87.23 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 56.00 0.02 0.20 100.0 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1686.00 0.57 5.96 63.03 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 558.00 0.19 1.97 47.86 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 13268.00 4.46 46.94 100.0 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 17290.00 5.81 61.17 93.25 RNY4-201 misc RNA parietal lobe (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1095.00 82.58 3.87 88.24 MIR3142HG-201 lncRNA parietal lobe (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 5963.00 80.28 21.10 100.0 SNHG6-204 retained intron parietal lobe (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 12092.00 31.56 42.78 100.0 MIR151A-201 miRNA parietal lobe (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 20757.00 54.18 73.43 83.13 MIR151A-201 miRNA parietal lobe (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1587.00 92.81 5.61 100.0 DENND3-221 protein coding parietal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 12.00 0.00 0.04 100.0 WDR74-204 protein coding parietal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 40.00 0.02 0.14 66.67 WDR74-204 protein coding parietal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 2736.00 1.05 9.68 71.96 WDR74-204 protein coding parietal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 20.00 0.01 0.07 33.33 WDR74-204 protein coding parietal lobe (Tissue)