ENCFF001REQ

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 54571.00 89.67 138.50 98.39 MIR30D-201 miRNA K562 (Cell line)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 28433.00 7.21 72.16 98.62 MIR126-201 miRNA K562 (Cell line)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 358824.00 90.96 910.66 100.0 MIR126-201 miRNA K562 (Cell line)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 4532.00 73.42 11.50 100.0 MIR374A-201 miRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 89673.00 4.73 227.58 98.7 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 11013.00 0.58 27.95 61.3 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 49709.00 2.62 126.16 69.71 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 21012.00 1.11 53.33 100.0 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 3646.00 0.19 9.25 20.44 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 1471.00 0.08 3.73 100.0 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 15694.04 0.83 39.83 57.09 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 67448.00 3.55 171.18 80.61 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 33209.00 1.75 84.28 56.24 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 20442.00 1.08 51.88 83.26 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 18465.00 0.97 46.86 100.0 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 9860.00 0.52 25.02 66.23 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 19140.68 1.01 48.58 52.72 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 22329.49 1.18 56.67 69.19 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 8602.00 0.45 21.83 44.0 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 24084.00 1.27 61.12 74.83 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 30742.29 1.62 78.02 48.36 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 257512.00 13.57 653.54 99.54 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 16039.00 0.85 40.71 59.43 RNA5S12-201 rRNA K562 (Cell line)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 456.00 5.74 1.16 100.0 Y_RNA.14-201 misc RNA K562 (Cell line)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 2225.00 12.70 5.65 100.0 RNU5E-1-201 snRNA K562 (Cell line)