ENCFF001REQ

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 1558.00 95.35 3.95 98.05 MIR381-201 miRNA K562 (Cell line)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 30219.00 86.32 76.69 91.67 MIR103A2-201 miRNA K562 (Cell line)
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 16.00 66.67 0.04 100.0 MIR369-201 miRNA K562 (Cell line)
ENST00000362155.4 ENST00000362155.4_44_64_+ 44–64 6.00 25.00 0.02 100.0 MIR369-201 miRNA K562 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 5366.00 34.93 13.62 100.0 MIR425-201 miRNA K562 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 5615.00 36.55 14.25 100.0 MIR425-201 miRNA K562 (Cell line)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 1695.00 65.19 4.30 100.0 MIR210-201 miRNA K562 (Cell line)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 381883.00 94.99 969.18 96.45 MIR378A-201 miRNA K562 (Cell line)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 651.00 70.68 1.65 100.0 MIR361-201 miRNA K562 (Cell line)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 1072.00 1.81 2.72 19.6 MIR101-2-201 miRNA K562 (Cell line)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 51845.00 87.38 131.58 92.18 MIR101-2-201 miRNA K562 (Cell line)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 4.00 30.77 0.01 100.0 MIR323A-201 miRNA K562 (Cell line)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 129848.00 97.53 329.54 98.57 MIR26A1-201 miRNA K562 (Cell line)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 19.00 47.50 0.05 100.0 MIR129-2-201 miRNA K562 (Cell line)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 539.00 71.96 1.37 100.0 MIR342-201 miRNA K562 (Cell line)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 13085.00 2.10 33.21 100.0 MIR148A-201 miRNA K562 (Cell line)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 558320.00 89.43 1416.96 92.2 MIR148A-201 miRNA K562 (Cell line)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 209.00 96.31 0.53 100.0 MIR410-201 miRNA K562 (Cell line)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 200.00 60.79 0.51 100.0 MIR409-201 miRNA K562 (Cell line)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 1522.00 98.38 3.86 100.0 MIR411-201 miRNA K562 (Cell line)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 20081.00 92.84 50.96 97.33 MIR26B-201 miRNA K562 (Cell line)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 29287.00 81.09 74.33 92.59 MIR148B-201 miRNA K562 (Cell line)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 642.00 89.42 1.63 99.07 MIRLET7G-201 miRNA K562 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 54571.00 89.67 138.50 98.39 MIR30D-201 miRNA K562 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 1003.00 1.65 2.55 52.93 MIR30D-201 miRNA K562 (Cell line)