ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 548.00 2.68 1.02 58.42 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 1229.00 6.01 2.28 100.0 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 600.00 2.93 1.12 100.0 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 292.00 1.43 0.54 100.0 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 1886.00 9.22 3.51 100.0 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 1300.00 6.35 2.42 66.63 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 608.00 2.97 1.13 100.0 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 826.00 4.04 1.54 75.02 7SK.1-201 misc RNA K562 (Cell line)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 933.00 53.96 1.73 100.0 SNORD14C-201 snoRNA K562 (Cell line)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 3319.00 46.55 6.17 100.0 RNA5SP77-201 rRNA pseudogene K562 (Cell line)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 63.00 9.72 0.12 100.0 SNORD114-22-201 snoRNA K562 (Cell line)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 360.00 55.56 0.67 76.76 SNORD114-22-201 snoRNA K562 (Cell line)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 470.00 0.45 0.87 100.0 SNORD6-201 snoRNA K562 (Cell line)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 93202.00 89.04 173.26 100.0 SNORD6-201 snoRNA K562 (Cell line)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 1239.00 21.27 2.30 100.0 RNY3-201 misc RNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6696.92 34.99 12.45 75.41 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 942.00 4.92 1.75 100.0 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 2552.00 13.33 4.74 100.0 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 479.00 2.50 0.89 81.32 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 642.00 3.35 1.19 100.0 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 2245.00 11.73 4.17 78.77 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 2224.36 11.62 4.13 25.05 SNORD82-201 snoRNA K562 (Cell line)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 677006.00 95.68 1258.52 98.01 MIR146B-201 miRNA K562 (Cell line)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 9.00 3.04 0.02 100.0 SNHG20-201 lncRNA K562 (Cell line)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 1306.00 18.44 2.43 100.0 ATP5MK-205 protein coding K562 (Cell line)