ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 672.33 1.38 1.25 37.69 ENST00000823279 lncRNA K562 (Cell line)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 631.00 1.30 1.17 100.0 ENST00000823279 lncRNA K562 (Cell line)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 531.32 1.09 0.99 55.75 ENST00000823279 lncRNA K562 (Cell line)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 1864.55 3.83 3.47 64.49 ENST00000823279 lncRNA K562 (Cell line)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 1294.00 2.66 2.41 100.0 ENST00000823279 lncRNA K562 (Cell line)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 4202.00 8.63 7.81 99.27 ENST00000823279 lncRNA K562 (Cell line)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 1234.42 2.53 2.29 34.66 ENST00000823279 lncRNA K562 (Cell line)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 1465.00 3.01 2.72 81.25 ENST00000823279 lncRNA K562 (Cell line)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 4056.43 8.33 7.54 36.35 ENST00000823279 lncRNA K562 (Cell line)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 7144.24 14.67 13.28 56.59 ENST00000823801 lncRNA K562 (Cell line)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 300286.00 40.66 558.22 100.0 GAS5-377 lncRNA K562 (Cell line)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 1750.00 0.24 3.25 100.0 GAS5-377 lncRNA K562 (Cell line)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 2298.00 0.31 4.27 100.0 GAS5-377 lncRNA K562 (Cell line)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 417481.00 56.53 776.08 100.0 GAS5-377 lncRNA K562 (Cell line)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 3.00 37.50 0.01 100.0 MIR205HG-245 lncRNA K562 (Cell line)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 1769.00 22.72 3.29 100.0 TAF12-DT-204 lncRNA K562 (Cell line)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 461597.00 91.64 858.09 99.85 ZFAS1-238 lncRNA K562 (Cell line)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 1195.00 0.24 2.22 100.0 ZFAS1-238 lncRNA K562 (Cell line)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 2234.00 0.44 4.15 100.0 ZFAS1-238 lncRNA K562 (Cell line)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 2688.00 0.53 5.00 100.0 ZFAS1-238 lncRNA K562 (Cell line)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 1462.00 1.58 2.72 100.0 ZFAS1-242 lncRNA K562 (Cell line)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 87610.00 94.70 162.86 100.0 ZFAS1-242 lncRNA K562 (Cell line)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 1584.00 35.48 2.94 100.0 ENST00000837997 lncRNA K562 (Cell line)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 1181.00 26.46 2.20 100.0 ENST00000837997 lncRNA K562 (Cell line)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 5343.00 65.89 9.93 76.69 ENST00000839036 lncRNA K562 (Cell line)