ENCFF001REL

Library Details

Organism: Homo Sapiens
Biosample: K562 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AES
Description: Part of ENCODE experiment ENCSR000AES. The libraries contained in this experiment come from independent growths of cell line K562. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. These data were collected as part of the RNA Evaluation Study.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 644.00 96.41 1.20 98.02 MIR381-201 miRNA K562 (Cell line)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 21453.00 88.81 39.88 93.73 MIR103A2-201 miRNA K562 (Cell line)
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 5.00 50.00 0.01 100.0 MIR369-201 miRNA K562 (Cell line)
ENST00000362155.4 ENST00000362155.4_44_64_+ 44–64 3.00 30.00 0.01 100.0 MIR369-201 miRNA K562 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 2512.00 26.92 4.67 100.0 MIR425-201 miRNA K562 (Cell line)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 4175.00 44.75 7.76 100.0 MIR425-201 miRNA K562 (Cell line)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 948.00 63.97 1.76 100.0 MIR210-201 miRNA K562 (Cell line)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 273170.00 95.90 507.81 97.17 MIR378A-201 miRNA K562 (Cell line)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 451.00 64.99 0.84 100.0 MIR361-201 miRNA K562 (Cell line)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 363.00 1.86 0.67 20.39 MIR101-2-201 miRNA K562 (Cell line)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 17118.00 87.75 31.82 92.36 MIR101-2-201 miRNA K562 (Cell line)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 3.00 50.00 0.01 100.0 MIR323A-201 miRNA K562 (Cell line)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 78064.00 97.80 145.12 98.68 MIR26A1-201 miRNA K562 (Cell line)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 18.00 72.00 0.03 100.0 MIR129-2-201 miRNA K562 (Cell line)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 309.00 69.44 0.57 100.0 MIR342-201 miRNA K562 (Cell line)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 4834.00 2.09 8.99 100.0 MIR148A-201 miRNA K562 (Cell line)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 206244.00 88.98 383.40 91.76 MIR148A-201 miRNA K562 (Cell line)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 150.00 98.68 0.28 100.0 MIR410-201 miRNA K562 (Cell line)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 180.00 82.57 0.33 100.0 MIR409-201 miRNA K562 (Cell line)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 540.00 99.08 1.00 100.0 MIR411-201 miRNA K562 (Cell line)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 11854.00 93.95 22.04 97.72 MIR26B-201 miRNA K562 (Cell line)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 14359.00 82.87 26.69 93.59 MIR148B-201 miRNA K562 (Cell line)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 670.00 95.71 1.25 99.55 MIRLET7G-201 miRNA K562 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 43523.00 93.50 80.91 98.81 MIR30D-201 miRNA K562 (Cell line)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 661.00 1.42 1.23 55.87 MIR30D-201 miRNA K562 (Cell line)