ENCFF000KEC

Library Details

Organism: Homo Sapiens
Biosample: melanocyte of skin (Primary cell)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000CVK
Description: Part of ENCODE experiment ENCSR000CVK. RNA-seq on human skin melanocytes primary whole cells (NHEM.f-M2) from rRNA-depleted Total RNA greater than 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 4533.17 48.74 401.19 69.53 SNHG19-202 lncRNA melanocyte of skin (Primary cell)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 2079.28 22.36 184.02 35.56 SNHG19-202 lncRNA melanocyte of skin (Primary cell)
ENST00000693179.2 ENST00000693179.2_532_619_+ 532–619 880.00 26.62 77.88 100.0 SNHG8-214 lncRNA melanocyte of skin (Primary cell)
ENST00000722183.1 ENST00000722183.1_108_192_+ 108–192 1156.00 57.51 102.31 100.0 ENST00000722183 lncRNA melanocyte of skin (Primary cell)
ENST00000747512.1 ENST00000747512.1_63_156_+ 63–156 1097.00 79.96 97.08 100.0 ENST00000747512 lncRNA melanocyte of skin (Primary cell)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 5.00 0.03 0.44 100.0 ENST00000772672 lncRNA melanocyte of skin (Primary cell)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 12323.00 76.51 1090.59 100.0 ENST00000772672 lncRNA melanocyte of skin (Primary cell)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 0.73 0.06 0.06 72.83 SNHG25-206 lncRNA melanocyte of skin (Primary cell)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 1.00 0.30 0.09 7.69 ENST00000788343 lncRNA melanocyte of skin (Primary cell)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 6.00 0.12 0.53 100.0 ENST00000823279 lncRNA melanocyte of skin (Primary cell)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 55.00 1.09 4.87 3.37 ENST00000823279 lncRNA melanocyte of skin (Primary cell)