ENCFF000JNF

Library Details

Organism: Homo Sapiens
Biosample: vein endothelial cell (Primary cell)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000CVI
Description: Part of ENCODE experiment ENCSR000CVI. The libraries contained in this experiment come from saphenous vein endothelial primary whole cells, HSaVEC isolated from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000722183.1 ENST00000722183.1_108_192_+ 108–192 1681.00 75.38 49.35 100.0 ENST00000722183 lncRNA vein endothelial cell (Primary cell)
ENST00000747512.1 ENST00000747512.1_63_156_+ 63–156 982.00 80.43 28.83 100.0 ENST00000747512 lncRNA vein endothelial cell (Primary cell)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 13201.00 90.28 387.52 100.0 ENST00000772672 lncRNA vein endothelial cell (Primary cell)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 16.00 3.44 0.47 61.54 ENST00000788343 lncRNA vein endothelial cell (Primary cell)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 5.00 0.12 0.15 100.0 ENST00000823279 lncRNA vein endothelial cell (Primary cell)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 31.00 0.77 0.91 3.72 ENST00000823279 lncRNA vein endothelial cell (Primary cell)