ENCFF000JMV

Library Details

Organism: Homo Sapiens
Biosample: placental epithelial cell (Primary cell)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000CVH
Description: Part of ENCODE experiment ENCSR000CVH. The libraries contained in this experiment come from placental epithelial primary whole cells, HPIEpC isolated from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000693179.2 ENST00000693179.2_532_619_+ 532–619 1907.00 34.27 42.03 100.0 SNHG8-214 lncRNA placental epithelial cell (Primary cell)
ENST00000722183.1 ENST00000722183.1_108_192_+ 108–192 1147.00 53.88 25.28 100.0 ENST00000722183 lncRNA placental epithelial cell (Primary cell)
ENST00000747512.1 ENST00000747512.1_63_156_+ 63–156 222.00 76.55 4.89 100.0 ENST00000747512 lncRNA placental epithelial cell (Primary cell)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 0.95 0.34 0.02 95.04 ENST00000756336 lncRNA placental epithelial cell (Primary cell)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 9.00 0.04 0.20 100.0 ENST00000772672 lncRNA placental epithelial cell (Primary cell)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 22740.00 89.98 501.20 100.0 ENST00000772672 lncRNA placental epithelial cell (Primary cell)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 0.73 0.04 0.02 72.83 SNHG25-206 lncRNA placental epithelial cell (Primary cell)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 16.00 3.40 0.35 36.36 ENST00000788343 lncRNA placental epithelial cell (Primary cell)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 1.00 0.03 0.02 100.0 ENST00000823279 lncRNA placental epithelial cell (Primary cell)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 5.00 0.14 0.11 100.0 ENST00000823279 lncRNA placental epithelial cell (Primary cell)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 32.00 0.89 0.71 3.97 ENST00000823279 lncRNA placental epithelial cell (Primary cell)