ENCFF000JKT
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | mesenchymal stem cell of Wharton's jelly (Primary cell) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000CVL |
| Description: | Part of ENCODE experiment ENCSR000CVL. The libraries contained in this experiment come from umbilical cord derived mesenchymal stem cell primary whole cells, hMSC-UC isolated from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000788343.1 | ENST00000788343.1_17_107_+ | 17–107 | 7.00 | 2.33 | 0.36 | 46.67 | ENST00000788343 | lncRNA | mesenchymal stem cell of Wharton's jelly (Primary cell) |
| ENST00000823279.1 | ENST00000823279.1_86_169_+ | 86–169 | 2.00 | 0.11 | 0.10 | 100.0 | ENST00000823279 | lncRNA | mesenchymal stem cell of Wharton's jelly (Primary cell) |
| ENST00000823279.1 | ENST00000823279.1_78_169_+ | 78–169 | 25.00 | 1.38 | 1.27 | 8.04 | ENST00000823279 | lncRNA | mesenchymal stem cell of Wharton's jelly (Primary cell) |