ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 1737.00 16.76 1.05 79.46 RNA5SP145-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 22.00 20.18 0.01 100.0 Y_RNA.105-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 741.00 65.34 0.45 100.0 RNY4P9-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 15.00 0.33 0.01 100.0 RNU5B-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 24.00 0.53 0.01 100.0 RNU5B-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 11.00 0.25 0.01 100.0 RNU5B-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1244.00 27.71 0.75 100.0 RNU5B-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 288.00 6.42 0.17 100.0 RNU5B-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 79.00 1.76 0.05 55.63 RNU5B-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 2554.00 97.70 1.55 99.53 SNORD115-18-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 32.00 3.50 0.02 78.05 RNY4P27-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 400.00 43.81 0.24 97.8 RNY4P27-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 577.00 18.84 0.35 100.0 Y_RNA.136-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 465.00 86.92 0.28 100.0 SNORD115-41-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 31.00 41.89 0.02 100.0 SNORD115-5-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 78.00 86.67 0.05 100.0 SNORD115-33-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 545.00 60.62 0.33 80.98 SNORD114-25-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 768.00 84.67 0.47 100.0 SNORD113-7-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 120.00 58.25 0.07 100.0 SNORD115-8-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 291.00 46.63 0.18 100.0 Y_RNA.181-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 111.00 69.38 0.07 100.0 SNORD115-16-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 87.00 66.92 0.05 100.0 SNORD115-32-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 65.00 72.22 0.04 100.0 SNORD115-30-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 1527.91 6.30 0.93 33.48 RNY1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 373.00 1.54 0.23 100.0 RNY1-201 misc RNA neural progenitor cell (In vitro differentiated cells)