ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 1481.00 0.47 0.90 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 105.00 0.03 0.06 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 418703.00 90.17 254.03 97.41 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 13.00 0.00 0.01 54.17 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 15.00 0.00 0.01 62.5 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 9726.00 22.11 5.90 92.07 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 105.00 87.50 0.06 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 1.00 0.33 0.00 14.29 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 20.00 83.33 0.01 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 14294.00 31.88 8.67 57.41 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 10606.00 23.66 6.43 42.59 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 4727.00 10.54 2.87 91.2 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 72.68 1.32 0.04 2.69 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 2887.86 52.25 1.75 96.17 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 176.00 3.18 0.11 79.64 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 2251.00 86.54 1.37 95.18 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 1.00 0.08 0.00 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 650.00 4.80 0.39 66.67 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 527.00 1.66 0.32 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 753.00 1.35 0.46 59.38 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 52.00 13.30 0.03 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 3307.00 26.69 2.01 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 24868.00 63.59 15.09 98.7 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 10.00 0.04 0.01 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 1677.00 6.26 1.02 44.02 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA neural progenitor cell (In vitro differentiated cells)