ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 702.00 5.17 0.43 51.92 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 1403.00 11.52 0.85 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 140.00 2.70 0.08 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 1940.00 37.36 1.18 88.99 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 795.00 15.31 0.48 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 21.00 0.40 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 2.00 0.04 0.00 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1289.00 13.37 0.78 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 204.00 7.25 0.12 65.59 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 292.00 6.44 0.18 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 13005.00 64.62 7.89 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 35.00 0.17 0.02 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 2.00 0.01 0.00 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 52.00 0.26 0.03 88.14 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 432.00 0.09 0.26 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 12.00 7.27 0.01 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 65.00 4.33 0.04 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 15.00 1.00 0.01 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 6764.00 32.72 4.10 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 4.00 0.02 0.00 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 165.00 39.19 0.10 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 489.00 0.16 0.30 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 22.00 0.01 0.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 18441.00 5.91 11.19 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA neural progenitor cell (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 83.00 0.03 0.05 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA neural progenitor cell (In vitro differentiated cells)