ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 6.00 18.18 0.00 100.0 MIR374A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 112.00 70.89 0.07 100.0 MIR31-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 53.00 0.00 0.03 100.0 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 8550.00 0.38 5.19 80.65 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 20762.00 0.91 12.60 87.77 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 458.00 0.02 0.28 91.6 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 548.00 0.02 0.33 73.46 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 93.00 0.00 0.06 100.0 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 4884.00 0.21 2.96 64.13 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 1901.00 0.08 1.15 100.0 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 3653.61 0.16 2.22 39.68 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 6912.00 0.30 4.19 61.51 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 1568.80 0.07 0.95 51.03 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 2092516.00 91.88 1269.54 99.86 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 3702.00 0.16 2.25 69.98 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 3463.00 0.15 2.10 85.68 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 4864.00 0.21 2.95 48.48 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 207.00 0.01 0.13 76.38 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 1144.44 0.05 0.69 56.77 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 7311.98 0.32 4.44 62.41 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 561.00 0.02 0.34 49.21 RNA5S12-201 rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 393.00 9.58 0.24 100.0 Y_RNA.14-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 40.00 47.62 0.02 100.0 SNORD115-34-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 103.00 3.48 0.06 100.0 RNU5E-1-201 snRNA neural progenitor cell (In vitro differentiated cells)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 42.00 0.41 0.03 8.4 RNA5SP370-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)