ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1038.00 1.85 0.63 60.92 ENST00000651540 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 19.00 0.03 0.01 100.0 ENST00000651540 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 48.00 0.09 0.03 100.0 ENST00000651540 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 2327.00 4.15 1.41 100.0 ENST00000651540 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 147.00 0.26 0.09 100.0 ENST00000651540 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 34.00 0.06 0.02 100.0 ENST00000651540 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 15145.00 26.99 9.19 71.16 ENST00000651540 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 1105.00 1.97 0.67 100.0 ENST00000651540 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 17819.00 31.75 10.81 60.4 ENST00000651540 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 3.00 1.65 0.00 100.0 MIRLET7A1HG-203 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 479.00 51.34 0.29 100.0 MEG8-225 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 886225.00 89.06 537.68 100.0 SNHG29-232 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 176.00 0.02 0.11 100.0 SNHG29-232 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 15.00 0.00 0.01 100.0 SNHG29-232 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 3.00 0.00 0.00 100.0 SNHG29-232 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 57143.00 5.74 34.67 100.0 SNHG29-232 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 39520.00 3.97 23.98 100.0 SNHG29-232 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000654356.2 ENST00000654356.2_463_540_+ 463–540 1.00 0.00 0.00 100.0 SNHG29-232 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 1104.00 0.22 0.67 100.0 SNHG14-234 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 216315.00 42.53 131.24 99.0 SNHG14-234 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 57.00 0.01 0.03 100.0 SNHG14-234 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 44295.00 8.71 26.87 100.0 SNHG14-234 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 89060.00 17.51 54.03 100.0 SNHG14-234 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 110924.00 21.81 67.30 99.54 SNHG14-234 lncRNA neural progenitor cell (In vitro differentiated cells)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 1412.00 1.62 0.86 41.42 ENST00000655317 lncRNA neural progenitor cell (In vitro differentiated cells)