ENCFF994BMY

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 1470.00 1.29 0.89 87.45 MT-TY-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 439.00 0.39 0.27 100.0 MT-TY-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 17.00 11.81 0.01 100.0 MT-TD-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 3808.00 37.71 2.31 100.0 MT-TK-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 3576.00 35.41 2.17 100.0 MT-TK-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 29.00 0.29 0.02 100.0 MT-TK-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 1.00 0.01 0.00 100.0 MT-TK-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 79.00 10.39 0.05 74.53 MT-TS2-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 183.00 24.08 0.11 100.0 MT-TS2-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 30.00 3.95 0.02 100.0 MT-TS2-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 55.00 2.99 0.03 100.0 MT-TL2-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 91.00 0.12 0.06 28.89 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 8.00 0.01 0.00 100.0 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 48536.00 65.95 29.45 83.48 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 514.00 0.70 0.31 100.0 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 774.00 1.05 0.47 100.0 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 2191.00 2.98 1.33 77.89 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 442.00 0.60 0.27 82.93 MT-TE-201 Mt tRNA neural progenitor cell (In vitro differentiated cells)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 1722.00 14.05 1.04 100.0 MT-RNR1-201 Mt rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1766.00 14.41 1.07 100.0 MT-RNR1-201 Mt rRNA neural progenitor cell (In vitro differentiated cells)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 239.00 56.90 0.15 100.0 MIR454-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 178.00 49.58 0.11 100.0 MIR501-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 969.00 92.46 0.59 100.0 MIR769-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 257.00 74.49 0.16 100.0 KRTAP19-1-201 protein coding neural progenitor cell (In vitro differentiated cells)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 24.00 40.68 0.01 100.0 MIR708-201 miRNA neural progenitor cell (In vitro differentiated cells)