ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 3566.00 3.63 34.57 76.92 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 6777.00 6.89 65.71 98.91 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 271.00 0.28 2.63 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 299.00 0.30 2.90 87.43 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 20.88 0.02 0.20 11.47 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 1356.00 1.38 13.15 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 138.00 0.14 1.34 56.79 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 531.00 0.54 5.15 100.0 SNHG1-248 lncRNA body of pancreas (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 320.00 24.43 3.10 100.0 SNHG14-315 lncRNA body of pancreas (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 230.00 17.56 2.23 100.0 SNHG14-315 lncRNA body of pancreas (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 129.00 9.85 1.25 67.89 SNHG14-315 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 364.00 0.16 3.53 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 135592.16 57.88 1314.65 61.38 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 33.00 0.01 0.32 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 93082.12 39.74 902.49 41.07 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 1886.00 0.81 18.29 95.69 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 418.00 0.18 4.05 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 1119.00 0.48 10.85 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 70.00 0.03 0.68 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 669.00 0.29 6.49 100.0 SNHG5-273 lncRNA body of pancreas (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 406.00 0.72 3.94 93.12 MEG8-251 lncRNA body of pancreas (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 1546.00 2.73 14.99 54.75 MEG8-251 lncRNA body of pancreas (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 51058.00 90.18 495.04 99.31 MEG8-251 lncRNA body of pancreas (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 1366.00 2.41 13.24 48.93 MEG8-251 lncRNA body of pancreas (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 739.00 59.79 7.17 95.11 SNHG14-336 lncRNA body of pancreas (Tissue)