ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 307.00 0.33 2.98 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 1784.00 1.90 17.30 93.7 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 33.00 0.04 0.32 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 92.00 0.10 0.89 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 36.00 0.04 0.35 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 47333.00 50.42 458.92 99.88 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 4882.00 5.20 47.33 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1221.00 1.30 11.84 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 77.00 0.08 0.75 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 6593.00 7.02 63.92 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 1142.00 1.22 11.07 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1569.00 1.67 15.21 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 6003.00 6.40 58.20 90.05 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 4998.00 5.32 48.46 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 92.00 0.10 0.89 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 86.00 0.09 0.83 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 723.00 0.77 7.01 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 148.00 0.16 1.43 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 407.00 0.43 3.95 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 8765.00 9.34 84.98 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 28.00 26.17 0.27 100.0 FTX-219 lncRNA body of pancreas (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 182.00 0.16 1.76 35.83 CTC1-214 protein coding body of pancreas (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 602.00 0.54 5.84 87.5 CTC1-214 protein coding body of pancreas (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 68873.00 61.81 667.77 85.27 CTC1-214 protein coding body of pancreas (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 326.00 0.29 3.16 64.17 CTC1-214 protein coding body of pancreas (Tissue)