ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 25671.00 95.46 248.90 97.82 ENST00000619323 lncRNA body of pancreas (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 315.00 11.12 3.05 100.0 SCARNA4-202 scaRNA body of pancreas (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 224.00 36.72 2.17 100.0 ENST00000625572 miRNA body of pancreas (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 1394.00 85.00 13.52 100.0 ENST00000628177 snoRNA body of pancreas (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 3677.00 94.35 35.65 100.0 ENST00000630615 snoRNA body of pancreas (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 180.00 17.54 1.75 100.0 DMRT2-209 protein coding body of pancreas (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 61.00 5.95 0.59 100.0 DMRT2-209 protein coding body of pancreas (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 928.00 64.53 9.00 100.0 SNORD98-201 snoRNA body of pancreas (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 126.00 8.76 1.22 100.0 SNORD98-201 snoRNA body of pancreas (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 16292.50 56.04 157.97 62.46 MIR106AHG-201 lncRNA body of pancreas (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 14.48 0.05 0.14 85.2 MIR106AHG-201 lncRNA body of pancreas (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 172.00 26.67 1.67 100.0 MEG8-222 lncRNA body of pancreas (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 63.00 9.77 0.61 100.0 MEG8-222 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 2678.00 67.35 25.96 100.0 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 17.00 0.43 0.16 100.0 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 2.00 0.05 0.02 100.0 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 84.00 2.11 0.81 63.64 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 147.00 3.70 1.43 82.58 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 164.00 4.12 1.59 78.85 SNHG14-224 lncRNA body of pancreas (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 9621.81 14.74 93.29 53.59 5S_rRNA.20-201 rRNA pseudogene body of pancreas (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 172.00 10.25 1.67 100.0 HSPA9-211 retained intron body of pancreas (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 591.00 35.22 5.73 79.22 HSPA9-211 retained intron body of pancreas (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 1134.00 54.89 10.99 100.0 DNM3OS-205 lncRNA body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 231.00 0.25 2.24 100.0 GAS5-230 retained intron body of pancreas (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 227.00 0.24 2.20 100.0 GAS5-230 retained intron body of pancreas (Tissue)