ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 40928.00 60.75 396.82 91.14 B4GALNT2-202 protein coding body of pancreas (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 68.00 0.10 0.66 100.0 B4GALNT2-202 protein coding body of pancreas (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 100.00 46.95 0.97 100.0 NDE1-202 protein coding body of pancreas (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 20.00 38.46 0.19 100.0 MIR887-201 miRNA body of pancreas (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 166.00 100.00 1.61 100.0 MIR889-201 miRNA body of pancreas (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 44.00 16.86 0.43 100.0 SNORD111-201 snoRNA body of pancreas (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 166.00 42.89 1.61 73.13 SNORD88A-201 snoRNA body of pancreas (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 212.00 69.97 2.06 100.0 MIR320B2-201 miRNA body of pancreas (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 138.00 1.89 1.34 100.0 SNORD100-201 snoRNA body of pancreas (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 5780.00 79.23 56.04 100.0 SNORD100-201 snoRNA body of pancreas (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 624.00 8.55 6.05 100.0 SNORD100-201 snoRNA body of pancreas (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 54.00 0.74 0.52 100.0 SNORD100-201 snoRNA body of pancreas (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 2974.00 79.65 28.83 100.0 SNORD111B-201 snoRNA body of pancreas (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 148.00 0.94 1.43 100.0 RNU2-36P-201 snRNA body of pancreas (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 477.00 3.03 4.62 100.0 RNU2-36P-201 snRNA body of pancreas (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 2397.00 4.54 23.24 100.0 SNORD19C-201 snoRNA body of pancreas (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 48714.00 92.17 472.31 99.46 SNORD19C-201 snoRNA body of pancreas (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 25.00 2.30 0.24 100.0 SNORD12B-201 snoRNA body of pancreas (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 45.00 4.14 0.44 100.0 SNORD12B-201 snoRNA body of pancreas (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 820.00 75.51 7.95 82.49 SNORD12B-201 snoRNA body of pancreas (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 11.00 52.38 0.11 100.0 Y_RNA.612-201 misc RNA body of pancreas (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 29.00 0.05 0.28 100.0 SNORD71-201 snoRNA body of pancreas (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 174.00 0.31 1.69 100.0 SNORD71-201 snoRNA body of pancreas (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 54782.00 96.21 531.15 100.0 SNORD71-201 snoRNA body of pancreas (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 40916.00 13.19 396.71 47.15 MIR194-2HG-201 lncRNA body of pancreas (Tissue)