ENCFF993BFO

Library Details

Organism: Homo Sapiens
Biosample: body of pancreas (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR099ACU
Description: Part of ENCODE experiment ENCSR099ACU. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's pancreas tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 439.00 0.27 4.26 93.8 MT-TE-201 Mt tRNA body of pancreas (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 293.00 32.13 2.84 100.0 MT-RNR1-201 Mt rRNA body of pancreas (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 1.00 0.11 0.01 100.0 MT-RNR1-201 Mt rRNA body of pancreas (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 5.00 100.00 0.05 100.0 MIR454-201 miRNA body of pancreas (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 11.00 100.00 0.11 100.0 MIR501-201 miRNA body of pancreas (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 344.00 84.11 3.34 100.0 MIR769-201 miRNA body of pancreas (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 125.00 27.29 1.21 100.0 KRTAP19-1-201 protein coding body of pancreas (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 3.00 100.00 0.03 100.0 MIR509-3-201 miRNA body of pancreas (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 27.00 100.00 0.26 100.0 MIR301B-201 miRNA body of pancreas (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 155.00 26.45 1.50 56.36 RNU1-82P-201 snRNA body of pancreas (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 1212.00 6.54 11.75 100.0 SNORD66-201 snoRNA body of pancreas (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 147.00 0.79 1.43 100.0 SNORD66-201 snoRNA body of pancreas (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 5673.00 30.60 55.00 69.19 SNORD66-201 snoRNA body of pancreas (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 1138.00 6.14 11.03 100.0 SNORD66-201 snoRNA body of pancreas (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 2.00 1.92 0.02 100.0 U3.17-201 snoRNA body of pancreas (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 2905.00 94.84 28.17 100.0 SNORD17-201 snoRNA body of pancreas (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 119.00 73.91 1.15 100.0 SNORD72-201 snoRNA body of pancreas (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 2186.00 70.33 21.19 94.51 RNY4P18-201 misc RNA body of pancreas (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 2672.00 72.83 25.91 100.0 SNORD90-201 snoRNA body of pancreas (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 496.00 13.52 4.81 85.52 SNORD90-201 snoRNA body of pancreas (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 3302.00 15.59 32.01 100.0 SNORD69-201 snoRNA body of pancreas (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 5016.00 23.68 48.63 100.0 SNORD69-201 snoRNA body of pancreas (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 6781.00 32.02 65.75 100.0 SNORD69-201 snoRNA body of pancreas (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1873.00 8.84 18.16 100.0 SNORD69-201 snoRNA body of pancreas (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 52.00 26.67 0.50 59.09 SNORD70-201 snoRNA body of pancreas (Tissue)