ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1375.00 89.23 1.54 96.9 MIR181C-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 82.00 5.32 0.09 100.0 MIR181C-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 17728.00 81.90 19.80 100.0 MIR194-1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 642.00 80.75 0.72 83.92 MIR128-2-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 1040.00 89.58 1.16 94.89 MIR99A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1168.00 2.96 1.30 82.66 MIR28-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 411.00 1.04 0.46 100.0 MIR28-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 34824.00 88.32 38.89 93.71 MIR28-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 2835.00 66.55 3.17 100.0 MIR183-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 329.00 74.27 0.37 100.0 MIR145-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 31.00 7.00 0.03 100.0 MIR145-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 9947.00 96.99 11.11 98.43 MIR186-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 7018.00 89.74 7.84 100.0 MIR200B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 169.00 39.67 0.19 100.0 MIR218-1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 27886.00 93.09 31.14 97.18 MIR181B2-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 1.00 100.00 0.00 100.0 MIR495-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 103763.00 85.59 115.87 85.99 MIR10B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 1030.19 42.43 1.15 61.65 MIR130B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 1070.21 44.08 1.20 51.08 MIR130B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 226.00 9.31 0.25 100.0 MIR130B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 10778.00 30.30 12.04 100.0 MIR199A1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 14.00 77.78 0.02 100.0 MIR487B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 2053.41 48.93 2.29 50.71 MIR93-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 1907.45 45.45 2.13 56.04 MIR93-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 1518.00 82.14 1.70 91.45 MIR532-201 miRNA hepatocyte (In vitro differentiated cells)