ENCFF908XAD

Library Details

Organism: Homo Sapiens
Biosample: omental fat pad (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR610GDH
Description: Part of ENCODE experiment ENCSR610GDH. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 400.00 0.10 0.94 100.0 SNHG5-273 lncRNA omental fat pad (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 95843.99 24.01 225.78 25.75 SNHG5-273 lncRNA omental fat pad (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 10210.00 2.56 24.05 91.79 SNHG5-273 lncRNA omental fat pad (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 41.00 0.01 0.10 100.0 SNHG5-273 lncRNA omental fat pad (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 655.00 0.16 1.54 100.0 SNHG5-273 lncRNA omental fat pad (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 78.00 0.02 0.18 100.0 SNHG5-273 lncRNA omental fat pad (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 2.00 0.00 0.00 100.0 SNHG5-273 lncRNA omental fat pad (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 4869.00 1.22 11.47 97.67 SNHG5-273 lncRNA omental fat pad (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 68.00 5.63 0.16 76.4 SNHG14-323 lncRNA omental fat pad (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 604.00 0.73 1.42 57.36 MEG8-251 lncRNA omental fat pad (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 76936.00 93.07 181.24 98.01 MEG8-251 lncRNA omental fat pad (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 597.00 0.72 1.41 50.77 MEG8-251 lncRNA omental fat pad (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 1496.00 1.81 3.52 94.62 MEG8-251 lncRNA omental fat pad (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 4.00 0.00 0.01 100.0 MEG8-251 lncRNA omental fat pad (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 800.00 19.69 1.88 32.98 SNHG14-336 lncRNA omental fat pad (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 3056.00 75.23 7.20 94.97 SNHG14-336 lncRNA omental fat pad (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 2049.00 77.67 4.83 95.21 SNHG14-341 lncRNA omental fat pad (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 5594.00 67.61 13.18 100.0 NCL-211 retained intron omental fat pad (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 294.00 45.23 0.69 100.0 FMN2-209 protein coding CDS not defined omental fat pad (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 224.00 0.75 0.53 58.79 LINC02739-203 lncRNA omental fat pad (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 157.00 0.53 0.37 41.21 LINC02739-203 lncRNA omental fat pad (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 61.00 0.20 0.14 100.0 LINC02739-203 lncRNA omental fat pad (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 50.00 0.17 0.12 100.0 LINC02739-203 lncRNA omental fat pad (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 20932.00 70.23 49.31 100.0 LINC02739-203 lncRNA omental fat pad (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 257.00 0.86 0.61 100.0 LINC02739-203 lncRNA omental fat pad (Tissue)