ENCFF908XAD

Library Details

Organism: Homo Sapiens
Biosample: omental fat pad (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR610GDH
Description: Part of ENCODE experiment ENCSR610GDH. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 191.00 0.01 0.45 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 937.00 0.06 2.21 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 250.00 0.02 0.59 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 14639.00 0.96 34.49 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 169.00 0.01 0.40 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 328.00 0.02 0.77 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 52196.00 3.41 122.96 85.74 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 1.00 0.00 0.00 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 319210.00 20.84 751.97 99.03 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 28.00 0.00 0.07 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 35.00 0.00 0.08 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 19988.00 1.30 47.09 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 888.00 0.06 2.09 72.97 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1218.00 0.08 2.87 36.91 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 355.00 0.02 0.84 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 842.00 0.05 1.98 58.88 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 348.00 0.02 0.82 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 227.00 0.01 0.53 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 111.00 0.01 0.26 100.0 SNHG1-248 lncRNA omental fat pad (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 5626.00 25.89 13.25 100.0 SNHG14-315 lncRNA omental fat pad (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 7349.00 33.82 17.31 91.93 SNHG14-315 lncRNA omental fat pad (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 5469.00 25.17 12.88 81.53 SNHG14-315 lncRNA omental fat pad (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1752.00 0.44 4.13 100.0 SNHG5-273 lncRNA omental fat pad (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 265149.95 66.42 624.62 74.34 SNHG5-273 lncRNA omental fat pad (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 129.00 0.03 0.30 100.0 SNHG5-273 lncRNA omental fat pad (Tissue)