ENCFF908XAD

Library Details

Organism: Homo Sapiens
Biosample: omental fat pad (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR610GDH
Description: Part of ENCODE experiment ENCSR610GDH. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 163.00 0.09 0.38 100.0 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 134851.00 72.71 317.67 98.38 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 636.00 0.34 1.50 100.0 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 276.00 0.15 0.65 46.0 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 738.00 0.40 1.74 100.0 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 775.00 0.42 1.83 100.0 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 52744.00 97.80 124.25 100.0 RPS8-207 protein coding CDS not defined omental fat pad (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 141.00 16.21 0.33 100.0 RPL7A-206 protein coding CDS not defined omental fat pad (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 99.00 11.38 0.23 100.0 RPL7A-206 protein coding CDS not defined omental fat pad (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 270.00 31.03 0.64 100.0 RPL7A-206 protein coding CDS not defined omental fat pad (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 63227.00 22.21 148.94 98.94 RPL21-209 retained intron omental fat pad (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 2239.00 0.79 5.27 100.0 RPL21-209 retained intron omental fat pad (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 216338.00 76.01 509.63 97.56 RPL21-209 retained intron omental fat pad (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 1.00 0.00 0.00 100.0 RPL21-209 retained intron omental fat pad (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 392.00 0.14 0.92 100.0 RPL21-209 retained intron omental fat pad (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 224.00 19.96 0.53 100.0 GABRE-209 retained intron omental fat pad (Tissue)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 36563.00 28.28 86.13 74.4 RPL13A-212 retained intron omental fat pad (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 290.00 0.22 0.68 100.0 RPL13A-212 retained intron omental fat pad (Tissue)
ENST00000488946.1 ENST00000488946.1_148_235_+ 148–235 4.00 0.00 0.01 100.0 RPL13A-212 retained intron omental fat pad (Tissue)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 400.00 0.31 0.94 100.0 RPL13A-212 retained intron omental fat pad (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 200.00 0.15 0.47 100.0 RPL13A-212 retained intron omental fat pad (Tissue)
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 1030.00 0.80 2.43 81.88 RPL13A-212 retained intron omental fat pad (Tissue)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 52717.00 40.77 124.19 99.42 RPL13A-212 retained intron omental fat pad (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 14111.00 10.91 33.24 100.0 RPL13A-212 retained intron omental fat pad (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 240.00 2.85 0.57 100.0 RPL7A-207 protein coding CDS not defined omental fat pad (Tissue)