ENCFF908XAD

Library Details

Organism: Homo Sapiens
Biosample: omental fat pad (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR610GDH
Description: Part of ENCODE experiment ENCSR610GDH. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 22977.00 96.83 54.13 100.0 SNORD42B-201 snoRNA omental fat pad (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 271.00 0.69 0.64 100.0 RNY4P25-201 misc RNA omental fat pad (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 362.00 72.11 0.85 100.0 SNORD121A-201 snoRNA omental fat pad (Tissue)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 294.00 6.73 0.69 46.15 SNORD126-201 snoRNA omental fat pad (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 3965.00 90.73 9.34 97.42 SNORD126-201 snoRNA omental fat pad (Tissue)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 10757.00 95.46 25.34 98.19 SNORD124-201 snoRNA omental fat pad (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 233.00 18.09 0.55 100.0 SNHG12-201 retained intron omental fat pad (Tissue)
ENST00000467105.1 ENST00000467105.1_582_665_+ 582–665 845.00 18.85 1.99 100.0 RPL3-212 retained intron omental fat pad (Tissue)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 883.00 19.70 2.08 86.06 RPL3-212 retained intron omental fat pad (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 3305.00 96.67 7.79 100.0 SMC1A-204 retained intron omental fat pad (Tissue)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 32310.00 91.04 76.11 98.7 RABGGTB-208 protein coding CDS not defined omental fat pad (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 796.00 8.51 1.88 100.0 DDX39B-219 retained intron omental fat pad (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 337.00 3.60 0.79 100.0 DDX39B-219 retained intron omental fat pad (Tissue)
ENST00000481456.1 ENST00000481456.1_825_898_+ 825–898 5841.00 62.43 13.76 86.35 DDX39B-219 retained intron omental fat pad (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 1481.00 74.27 3.49 100.0 RPS8-206 protein coding CDS not defined omental fat pad (Tissue)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 312099.00 97.07 735.22 99.69 RPL13-207 retained intron omental fat pad (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 4602.00 1.43 10.84 100.0 RPL13-207 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 134851.00 72.71 317.67 98.38 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 636.00 0.34 1.50 100.0 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 276.00 0.15 0.65 46.0 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 775.00 0.42 1.83 100.0 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 2196.00 1.18 5.17 47.67 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 299.00 0.16 0.70 41.07 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 928.00 0.50 2.19 47.06 EIF4A2-219 retained intron omental fat pad (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 111.00 0.06 0.26 41.26 EIF4A2-219 retained intron omental fat pad (Tissue)