ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 590.00 76.33 1.72 100.0 RPL23A-207 protein coding subcutaneous adipose tissue (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 844.00 89.79 2.46 100.0 MIR744-201 miRNA subcutaneous adipose tissue (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 34.00 59.65 0.10 100.0 MIR378C-201 miRNA subcutaneous adipose tissue (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 415.00 32.02 1.21 36.5 MIR142HG-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 1.00 0.08 0.00 100.0 MIR142HG-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 12.00 0.93 0.04 1.29 MIR142HG-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 1.00 0.02 0.00 100.0 SNORD3C-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 446.44 0.11 1.30 61.07 RPL23A-208 retained intron subcutaneous adipose tissue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 295.97 0.07 0.86 49.83 RPL23A-208 retained intron subcutaneous adipose tissue (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 330680.00 82.10 964.60 90.78 RPL23A-208 retained intron subcutaneous adipose tissue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 64861.00 16.10 189.20 89.47 RPL23A-208 retained intron subcutaneous adipose tissue (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 8151.00 6.90 23.78 63.68 RPL17-211 retained intron subcutaneous adipose tissue (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 20852.00 17.64 60.83 66.63 RPL17-211 retained intron subcutaneous adipose tissue (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 300.00 0.25 0.88 100.0 RPL17-211 retained intron subcutaneous adipose tissue (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 47330.00 40.05 138.06 87.98 RPL17-211 retained intron subcutaneous adipose tissue (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 28838.00 24.40 84.12 94.54 RPL17-211 retained intron subcutaneous adipose tissue (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 21.00 30.88 0.06 37.5 ENST00000582320 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 1.00 1.47 0.00 100.0 ENST00000582320 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 2.00 2.94 0.01 100.0 ENST00000582320 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 3285.00 13.20 9.58 100.0 RPL17-214 retained intron subcutaneous adipose tissue (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 10306.47 41.42 30.06 58.8 RPL17-214 retained intron subcutaneous adipose tissue (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 7954.97 31.97 23.20 43.0 RPL17-214 retained intron subcutaneous adipose tissue (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 261.00 0.08 0.76 100.0 SNORD43-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 319825.00 96.61 932.93 99.85 SNORD43-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 61.00 57.01 0.18 100.0 MIR151B-201 miRNA subcutaneous adipose tissue (Tissue)