ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 704.00 0.86 2.05 100.0 RPL4-202 retained intron subcutaneous adipose tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 13.00 0.02 0.04 100.0 RPL4-202 retained intron subcutaneous adipose tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 447.00 0.55 1.30 100.0 RPL4-202 retained intron subcutaneous adipose tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 533.00 0.65 1.55 100.0 RPL4-202 retained intron subcutaneous adipose tissue (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 2.00 0.00 0.01 100.0 ENST00000563103 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 5228.00 46.84 15.25 100.0 RPL4-207 retained intron subcutaneous adipose tissue (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 274.00 2.45 0.80 100.0 RPL4-207 retained intron subcutaneous adipose tissue (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 60721.00 90.44 177.12 97.15 ENST00000565336 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 1162.00 1.73 3.39 56.79 ENST00000565336 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 1311.00 0.59 3.82 100.0 RBMX-210 retained intron subcutaneous adipose tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 489.00 0.22 1.43 100.0 RBMX-210 retained intron subcutaneous adipose tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 1409.00 0.64 4.11 100.0 RBMX-210 retained intron subcutaneous adipose tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 141906.00 64.28 413.94 66.56 RBMX-210 retained intron subcutaneous adipose tissue (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 377.00 10.82 1.10 100.0 RPL4-214 retained intron subcutaneous adipose tissue (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 983.00 28.21 2.87 100.0 RPL4-214 retained intron subcutaneous adipose tissue (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 6360.60 14.32 18.55 20.47 POLG-DT-202 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 26843.83 60.44 78.30 83.68 POLG-DT-202 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 278.00 0.63 0.81 100.0 POLG-DT-202 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 7430.00 68.03 21.67 100.0 ENST00000570843 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 509.00 75.63 1.48 100.0 MIR497HG-207 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 20402.00 97.43 59.51 98.69 MIR22HG-212 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 414.00 0.94 1.21 82.97 SNORD53B-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 85.00 0.19 0.25 17.03 SNORD53B-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 40918.00 92.48 119.36 96.4 SNORD53B-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 180.00 55.05 0.53 100.0 ENST00000578036 lncRNA subcutaneous adipose tissue (Tissue)