ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 35521.00 96.27 103.62 100.0 SNORD42B-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 150.00 0.29 0.44 100.0 RNY4P25-201 misc RNA subcutaneous adipose tissue (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 629.00 76.99 1.83 100.0 SNORD121A-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 550.00 9.42 1.60 65.17 SNORD126-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 5070.00 86.86 14.79 96.96 SNORD126-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 11308.00 93.05 32.99 98.01 SNORD124-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 458.00 17.15 1.34 100.0 SNHG12-201 retained intron subcutaneous adipose tissue (Tissue)
ENST00000467105.1 ENST00000467105.1_582_665_+ 582–665 5648.00 40.64 16.48 100.0 RPL3-212 retained intron subcutaneous adipose tissue (Tissue)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 2546.00 18.32 7.43 55.87 RPL3-212 retained intron subcutaneous adipose tissue (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 2839.00 97.93 8.28 100.0 SMC1A-204 retained intron subcutaneous adipose tissue (Tissue)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 36883.00 89.82 107.59 98.17 RABGGTB-208 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 1007.00 7.83 2.94 100.0 DDX39B-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 297.00 2.31 0.87 100.0 DDX39B-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000481456.1 ENST00000481456.1_825_898_+ 825–898 7512.00 58.42 21.91 87.09 DDX39B-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 3037.00 78.07 8.86 100.0 RPS8-206 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 745285.00 97.79 2174.00 99.64 RPL13-207 retained intron subcutaneous adipose tissue (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 5249.00 0.69 15.31 100.0 RPL13-207 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 913.00 0.41 2.66 100.0 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 1680.00 0.75 4.90 44.35 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 10.00 0.00 0.03 100.0 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 2181.00 0.97 6.36 100.0 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 7967.00 3.56 23.24 69.25 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 364.00 0.16 1.06 21.81 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 1480.00 0.66 4.32 43.47 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 2388.00 1.07 6.97 58.07 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)