ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 3600.00 1.26 10.50 100.0 SNORD71-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 111.00 0.04 0.32 100.0 SNORD71-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 271316.00 94.65 791.43 99.43 SNORD71-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 344.00 72.12 1.00 88.43 MIR194-2HG-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 121.00 25.37 0.35 64.71 MIR194-2HG-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 697.00 1.84 2.03 100.0 LINC01783-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 1.00 25.00 0.00 100.0 RPS7P15-201 processed pseudogene subcutaneous adipose tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 418.00 8.56 1.22 100.0 SNORD62B-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 10.00 0.20 0.03 100.0 SNORD62B-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 988.00 20.23 2.88 89.25 SNORD62B-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 1122.00 22.97 3.27 100.0 SNORD62B-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 530.00 10.85 1.55 100.0 SNORD62B-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 6.00 75.00 0.02 100.0 MRPL32-203 nonsense mediated decay subcutaneous adipose tissue (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 17.00 50.00 0.05 100.0 ENST00000436739 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 4422.00 25.62 12.90 90.3 TMEM107-204 protein coding subcutaneous adipose tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 33.00 0.19 0.10 100.0 TMEM107-204 protein coding subcutaneous adipose tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 1283.00 7.43 3.74 100.0 TMEM107-204 protein coding subcutaneous adipose tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 119.00 0.69 0.35 100.0 TMEM107-204 protein coding subcutaneous adipose tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 2902.00 16.82 8.47 70.8 TMEM107-204 protein coding subcutaneous adipose tissue (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 3212.00 82.11 9.37 97.39 SNHG16-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 217.00 5.55 0.63 100.0 SNHG16-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 78979.00 85.80 230.38 95.95 SNORD105B-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 483.00 35.88 1.41 48.49 SNORD121B-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 125.00 0.16 0.36 100.0 SNORD127-201 snoRNA subcutaneous adipose tissue (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 75260.00 96.92 219.53 99.22 SNORD127-201 snoRNA subcutaneous adipose tissue (Tissue)