ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 175357.00 86.10 529.79 96.01 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 17897.70 50.68 54.07 66.13 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 9598.70 27.18 29.00 36.92 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 4129.00 11.69 12.47 85.72 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 725915.00 96.98 2193.15 98.65 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 779.00 22.38 2.35 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 19237.00 39.20 58.12 63.66 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 45.00 0.01 0.14 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 190.00 0.01 0.57 73.36 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 14759.00 78.51 44.59 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 154.00 1.80 0.47 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 655712.00 98.83 1981.05 99.84 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 147.00 0.12 0.44 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 46155.00 37.37 139.44 71.89 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 261.00 36.92 0.79 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 76.00 0.39 0.23 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 342.00 13.16 1.03 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 302486.00 98.97 913.88 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 3594.00 95.66 10.86 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 30339.00 48.56 91.66 92.95 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 403.00 0.64 1.22 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 13.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1441.00 47.12 4.35 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 425.00 4.29 1.28 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 41.00 0.32 0.12 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA Peyer's patch (Tissue)