ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 244.00 0.01 0.74 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 6983.00 57.08 21.10 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 86.00 5.46 0.26 26.06 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 1.00 0.06 0.00 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 244.00 15.48 0.74 73.94 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 1146.00 11.20 3.46 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 41.00 0.40 0.12 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 44420.00 95.79 134.20 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 204.00 51.39 0.62 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 2946.00 69.11 8.90 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 30.00 0.05 0.09 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 147.00 0.23 0.44 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 5113.00 8.05 15.45 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 376.00 0.59 1.14 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 271.00 0.43 0.82 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 192.00 0.30 0.58 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 1709.00 0.04 5.16 69.61 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 2315.00 0.05 6.99 62.5 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 4440.00 0.11 13.41 95.34 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 18577.00 41.48 56.13 77.47 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 9891.00 94.95 29.88 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 897.00 30.26 2.71 89.43 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 1996.00 96.43 6.03 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 217.00 0.11 0.66 92.74 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 17.00 0.01 0.05 7.26 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA Peyer's patch (Tissue)