ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 73.00 0.01 0.22 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 13.00 39.39 0.04 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 9587.00 21.41 28.96 88.38 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 110.00 0.25 0.33 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 613.00 1.37 1.85 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 309.00 11.63 0.93 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 35.00 0.00 0.11 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 155.00 0.01 0.47 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 2717.00 0.19 8.21 91.05 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 68.00 0.00 0.21 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 762.00 0.05 2.30 94.66 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 251959.00 17.73 761.22 46.68 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 6.00 0.00 0.02 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 2549.00 83.93 7.70 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 36.00 0.00 0.11 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 1343.00 19.20 4.06 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 1528.00 21.85 4.62 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 498.00 6.93 1.50 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 340.00 0.71 1.03 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 16.00 0.00 0.05 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 425.00 0.01 1.28 19.5 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 14449.00 38.86 43.65 62.69 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 13019.00 35.02 39.33 47.4 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 101.00 3.07 0.31 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 486.00 0.03 1.47 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA Peyer's patch (Tissue)